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	Docs: Fix warnings
Changes a bunch of :doc:`/cmd/*` to :cmd:ref:`*` with the intention of changing it later to something that replicates the previous effect of displaying the commands `short_help`.
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					 15 changed files with 90 additions and 89 deletions
				
			
		|  | @ -29,8 +29,7 @@ ezSAT | |||
| 
 | ||||
| The files in ``libs/ezsat`` provide a library for simplifying generating CNF | ||||
| formulas for SAT solvers. It also contains bindings of MiniSAT. The ezSAT | ||||
| library is written by C. Wolf. It is used by the `sat` pass (see | ||||
| :doc:`/cmd/sat`). | ||||
| library is written by C. Wolf. It is used by the `sat` pass. | ||||
| 
 | ||||
| fst | ||||
| --- | ||||
|  | @ -78,4 +77,4 @@ SubCircuit | |||
| The files in ``libs/subcircuit`` provide a library for solving the subcircuit | ||||
| isomorphism problem. It is written by C. Wolf and based on the Ullmann Subgraph | ||||
| Isomorphism Algorithm :cite:p:`UllmannSubgraphIsomorphism`. It is used by the | ||||
| extract pass (see :doc:`../cmd/extract`). | ||||
| `extract` pass. | ||||
|  |  | |||
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